xcp_d.workflows.anatomical.init_generate_hcp_surfaces_wf

xcp_d.workflows.anatomical.init_generate_hcp_surfaces_wf(output_dir, mem_gb, omp_nthreads, name='generate_hcp_surfaces_wf')[source]

Generate midthickness, inflated, and very-inflated HCP-style surfaces.

Workflow Graph

(Source code)

Parameters:

  • output_dir (str) – Path to the output directory for xcp_d derivatives. This should not include the xcp_d folder. For example, “/path/to/dset/derivatives/”.

  • mem_gb (float) – Memory limit, in gigabytes.

  • omp_nthreads (int) – Maximum number of threads an individual process may use.

  • name (str, optional) – Name of the workflow. This is used for working directories and workflow graphs. Default is “generate_hcp_surfaces_wf”.

Inputs:

  • name_source (str) – Path to the file that will be used as the source_file for datasinks.

  • pial_surf (str) – The surface file to inflate.

  • wm_surf (str) – The surface file to inflate.