xcp_d.workflows.anatomical.init_ants_xfm_to_fsl_wf

xcp_d.workflows.anatomical.init_ants_xfm_to_fsl_wf(mem_gb, omp_nthreads, name='ants_xfm_to_fsl_wf')[source]

Modify ANTS-style fMRIPrep transforms to work with Connectome Workbench/FSL FNIRT.

Workflow Graph

(Source code)

Parameters:

  • mem_gb (float) – Memory limit, in gigabytes.

  • omp_nthreads (int) – Maximum number of threads an individual process may use.

  • name (str, optional) – Name of the workflow. This is used for working directories and workflow graphs. Default is “ants_xfm_to_fsl_wf”.

Inputs:

  • anat_to_template_xfm – ANTS/fMRIPrep-style H5 transform from T1w image to template.

  • template_to_anat_xfm – ANTS/fMRIPrep-style H5 transform from template to T1w image.

Outputs:

  • world_xfm – TODO: Add description.

  • merged_warpfield – TODO: Add description.

  • merged_inv_warpfield – TODO: Add description.