xcp_d.workflows.execsummary.init_brainsprite_figures_wf

xcp_d.workflows.execsummary.init_brainsprite_figures_wf(output_dir, t1w_available, t2w_available, mem_gb, omp_nthreads, name='init_brainsprite_figures_wf')[source]

Create mosaic and PNG files for executive summary brainsprite.

Workflow Graph

(Source code)

Parameters:

  • output_dir (str) – Path to the output directory for xcp_d derivatives. This should not include the xcp_d folder. For example, “/path/to/dset/derivatives/”.

  • t1w_available (bool) – True if a T1w image is available.

  • t2w_available (bool) – True if a T2w image is available.

  • mem_gb (float) – Memory limit, in gigabytes.

  • omp_nthreads (int) – Maximum number of threads an individual process may use.

  • name (str, optional) – Name of the workflow. This is used for working directories and workflow graphs. Default is “init_brainsprite_figures_wf”.

Inputs:

  • t1w – Path to T1w image. Optional. Should only be defined if t1w_available is True.

  • t2w – Path to T2w image. Optional. Should only be defined if t2w_available is True.

  • lh_wm_surf

  • rh_wm_surf

  • lh_pial_surf

  • rh_pial_surf