xcp_d.interfaces.restingstate.SurfaceReHo

class xcp_d.interfaces.restingstate.SurfaceReHo(from_file=None, resource_monitor=None, **inputs)[source]

Calculate regional homogeneity (ReHo) on a surface file.

Examples

>>> from tempfile import TemporaryDirectory
>>> tmpdir = TemporaryDirectory()
>>> os.chdir(tmpdir.name)
.. doctest::
>>> surfacereho_wf = SurfaceReHo()
>>> surfacereho_wf.inputs.surf_bold = 'rhhemi.func.gii'
>>> surfacereho_wf.inputs.surf_hemi = 'R'
>>> surfacereho_wf.run()
.. testcleanup::
>>> tmpdir.cleanup()

Mandatory Inputs:

surf_bold (a pathlike object or string representing an existing file) – Left or right hemisphere gii .
surf_hemi (a string) – L or R .

Outputs:

surf_gii (a pathlike object or string representing an existing file) – lh hemisphere reho.

__init__(from_file=None, resource_monitor=None, **inputs)[source]: Subclasses must implement __init__

Methods

`__init__`([from_file, resource_monitor])	Subclasses must implement __init__
`aggregate_outputs`([runtime, needed_outputs])	Collate expected outputs and apply output traits validation.
`help`([returnhelp])	Prints class help
`load_inputs_from_json`(json_file[, overwrite])	A convenient way to load pre-set inputs from a JSON file.
`run`([cwd, ignore_exception])	Execute this interface.
`save_inputs_to_json`(json_file)	A convenient way to save current inputs to a JSON file.

Attributes

`always_run`	Should the interface be always run even if the inputs were not changed? Only applies to interfaces being run within a workflow context.
`can_resume`	Defines if the interface can reuse partial results after interruption.
`resource_monitor`
`version`	interfaces should implement a version property